Ocean model
Dr. Henderson built the ocean model using Fortran 77 and C code. The description from om_main.F is:
c
c Multimode linear equatorial ocean model, using the INC integration scheme.
c
c authors: N. Henderson(Naik), with contributions from:
c B. Blumenthal (multimode)
c R. Seager (AML - advective mixed layer)
c
c references:
c
c M. Israeli, Naik, N. and Cane, M.A., 2000.
c "An Unconditionally Stable Scheme for the Shallow Water Equations"
c https://doi.org/10.1175/1520-0493(2000)128<0810:AUSSFT>2.0.CO;2
c
c M.B. Blumenthal and Cane, M., 1989. "Accounting for
c parameter uncertainties in model verification: an illustration
c with tropical sea surface temperature,"
c J. Phys. Oceanogr.19, 815-830.
c https://doi.org/10.1175/1520-0485(1989)019<0815:AFPUIM>2.0.CO;2
c
c R. Seager, Blumenthal, M.B. and Kushnir, Y., 1995.
c "An advective atmospheric mixed layer model for ocean
c modeling purposes: Global simulation of surface heat fluxes",
c J. Climate, 8, 1951-1964.
c https://www.jstor.org/stable/26200030
c
c R. Seager, Kushnir, Y. and Cane, M.A., 1995.
c "On heat flux boundary conditions for ocean models"
c J. Phys. Oceanogr., 25, 3219-3230.
c https://doi.org/10.1175/1520-0485(1995)025<3219:OHFBCF>2.0.CO;2
c
Bibtex citation
@article{israeli2000unconditionally,
title={An unconditionally stable scheme for the shallow water equations},
author={Israeli, Moshe and Naik, Naomi H and Cane, Mark A},
journal={Monthly weather review},
volume={128},
number={3},
pages={810--823},
year={2000},
url={https://doi.org/10.1175/1520-0493(2000)128<0810:AUSSFT>2.0.CO;2}
}
@article{blumenthal1989accounting,
title={Accounting for parameter uncertainties in model verification: An illustration with tropical sea surface temperature},
author={Blumenthal, M Benno and Cane, Mark A},
journal={Journal of physical oceanography},
volume={19},
number={6},
pages={815--830},
url={https://doi.org/10.1175/1520-0485(1989)019<0815:AFPUIM>2.0.CO;2},
year={1989}
}
@article{seager1995advective,
title={An advective atmospheric mixed layer model for ocean modeling purposes: Global simulation of surface heat fluxes},
author={Seager, Richard and Blumenthal, M Benno and Kushnir, Yochanan},
journal={Journal of Climate},
volume={8},
number={8},
pages={1951--1964},
year={1995},
url={https://www.jstor.org/stable/26200030}
}
@article{seager1995heat,
title={On heat flux boundary conditions for ocean models},
author={Seager, Richard and Kushnir, Yochanan and Cane, Mark A},
journal={Journal of physical oceanography},
volume={25},
number={12},
pages={3219--3230},
year={1995},
url={https://doi.org/10.1175/1520-0485(1995)025<3219:OHFBCF>2.0.CO;2}
}
Glossary of output fields
TDEEP / tdeep - temperature of deep water
HTHERM / htherm - height of the thermocline?
W1 / w1 - upwelling speed in surface layer
(other posibilites: SST W1 UDTDX VDTDY UP_FLUX QPRIME QFC QNET)
Helpful background information
Baroclinic Rossby waves:
https://www.youtube.com/watch?v=ycs2AbC44EU
Barotropic Rossby waves:
Equatorial waves:
Structure of Ocean model
Compile the programs in SRC.
Run the programs in RUN.
Ocean model file structure:
files.txt
README.md
file_struct.txt
RUN
run-model
diag.tios
om_diag.log
om_run2f
qflx.ing
output/ -s
month.tios
spin.tios
om_diag
om_spin
DATA/ -s
om_diag.tr
SRC
om_mem.F
wrap-mod.F
om_data.h
diag.tios
om_test.tr
om_diag.log
om_qflux.F
om_forc.F
om_leap.F
Makefile
sst-mod.F
netcdf.inc
qflx.ing
output/ -s
cuf.h
om_main.F
om_core.F
om_core.h
om_sst.h
README
om_sst.F
sio.c
om_equi.h
om_equi.F
codb.c
om_tios.F
om_wrap.h
tios2cdf.c
om_wrap.F
om_test
om_ekm.F
om_c.c
fodb.F
om_diag
data-mod.F
om_para.h
DATA/ -s
tios.h
om_diag.tr
daio.c
om_test.log
DATA
rzk.pro
spline_ECMWF.txt
dQdf-sample.nc
om_mask.nc
qflx.nc
tau-ECMWF.y
sst-ECMWF-clim.nc
tau-ECMWF.x
dQdT-sample.nc
qflx-0.nc
tau-ECMWF-clim.x
tau-ECMWF-clim.y
output
om_spin.20y.restart
om_diag.nc
om_test.indx
om_diag.save
om_diag.data
om_test.data
om_test.save
om_diag.indx
Full current compiler details
GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44)
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44)
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.